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Gene: Ssna1 (SS nuclear autoantigen 1) Rattus norvegicus
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Symbol: Ssna1
Name: SS nuclear autoantigen 1
Description: Predicted to have identical protein binding activity. Predicted to be involved in ciliary receptor clustering involved in smoothened signaling pathway and intraciliary transport. Predicted to localize to the centrosome; ciliary basal body; and plasma membrane. Orthologous to human SSNA1 (SS nuclear autoantigen 1); INTERACTS WITH 2,4,6-trinitrotoluene; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC311802; Sjoegren syndrome nuclear autoantigen 1; Sjogren syndrome nuclear autoantigen 1; Sjogren's syndrome nuclear autoantigen 1
Orthologs:
Homo sapiens (human) : SSNA1 (SS nuclear autoantigen 1)  HGNC  Alliance
Mus musculus (house mouse) : Ssna1 (SS nuclear autoantigen 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ssna1 (SS nuclear autoantigen 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SSNA1 (SS nuclear autoantigen 1)
Canis lupus familiaris (dog) : SSNA1 (SS nuclear autoantigen 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ssna1 (SS nuclear autoantigen 1)
Sus scrofa (pig) : SSNA1 (SS nuclear autoantigen 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.032,489,017 - 2,490,481 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.032,470,451 - 2,471,889 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,435,747 - 3,436,469 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.133,435,392 - 3,436,283 (-)NCBI
Celera32,911,494 - 2,912,958 (-)NCBICelera
Cytogenetic Map3p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ssna1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310259
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.