Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Thap11 (THAP domain containing 11) Rattus norvegicus
Analyze
Symbol: Thap11
Name: THAP domain containing 11
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to localize to cytosol; intercellular bridge; and nucleoplasm. Orthologous to human THAP11 (THAP domain containing 11); INTERACTS WITH bisphenol A; C60 fullerene; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC307806; THAP domain-containing protein 11
Orthologs:
Homo sapiens (human) : THAP11 (THAP domain containing 11)  HGNC  Alliance
Mus musculus (house mouse) : Thap11 (THAP domain containing 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Thap11 (THAP domain containing 11)
Pan paniscus (bonobo/pygmy chimpanzee) : THAP11 (THAP domain containing 11)
Canis lupus familiaris (dog) : THAP11 (THAP domain containing 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Thap11 (THAP domain containing 11)
Sus scrofa (pig) : THAP11 (THAP domain containing 11)
Chlorocebus sabaeus (African green monkey) : THAP11 (THAP domain containing 11)
Heterocephalus glaber (naked mole-rat) : Thap11 (THAP domain containing 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01937,825,576 - 37,827,393 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1937,825,576 - 37,827,393 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01948,692,347 - 48,694,164 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41935,692,222 - 35,694,039 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11935,697,320 - 35,698,247 (+)NCBI
Celera1933,174,537 - 33,176,354 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Thap11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310268
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.