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Gene: Hoxb1 (homeo box B1) Rattus norvegicus
Symbol: Hoxb1
Name: homeo box B1
CRRD ID: 1310298
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and protein domain specific binding activity. Predicted to be involved in several processes, including central nervous system development; embryonic skeletal system morphogenesis; and positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human HOXB1 (homeobox B1); INTERACTS WITH (+)-pilocarpine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: homeobox protein Hox-B1; LOC303491
Homo sapiens (human) : HOXB1 (homeobox B1)  HGNC  Alliance
Mus musculus (house mouse) : Hoxb1 (homeobox B1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxb1 (homeobox B1)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXB1 (homeobox B1)
Canis lupus familiaris (dog) : HOXB1 (homeobox B1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxb1 (homeobox B1)
Sus scrofa (pig) : HOXB1 (homeobox B1)
Chlorocebus sabaeus (African green monkey) : HOXB1 (homeobox B1)
Heterocephalus glaber (naked mole-rat) : Hoxb1 (homeobox B1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01084,214,358 - 84,215,812 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1084,214,358 - 84,215,687 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01084,017,011 - 84,018,433 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41085,098,903 - 85,100,308 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11085,102,648 - 85,114,602 (+)NCBI
Celera1080,097,554 - 80,099,008 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Hoxb1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310298
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.