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Gene: Arhgef39 (Rho guanine nucleotide exchange factor 39) Rattus norvegicus
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Symbol: Arhgef39
Name: Rho guanine nucleotide exchange factor 39
Description: Predicted to have Rho guanyl-nucleotide exchange factor activity. Predicted to be involved in positive regulation of cell migration. Predicted to localize to the plasma membrane. Orthologous to human ARHGEF39 (Rho guanine nucleotide exchange factor 39); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC298404; LOC298404; RGD1310376; Rho guanine nucleotide exchange factor (GEF) 39; similar to hypothetical protein FLJ14642; vav-like protein C9orf100 homolog
Orthologs:
Homo sapiens (human) : ARHGEF39 (Rho guanine nucleotide exchange factor 39)  HGNC  Alliance
Mus musculus (house mouse) : Arhgef39 (Rho guanine nucleotide exchange factor (GEF) 39)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arhgef39 (Rho guanine nucleotide exchange factor 39)
Pan paniscus (bonobo/pygmy chimpanzee) : ARHGEF39 (Rho guanine nucleotide exchange factor 39)
Canis lupus familiaris (dog) : ARHGEF39 (Rho guanine nucleotide exchange factor 39)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arhgef39 (Rho guanine nucleotide exchange factor 39)
Sus scrofa (pig) : ARHGEF39 (Rho guanine nucleotide exchange factor 39)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0558,998,209 - 59,001,779 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0563,522,803 - 63,526,373 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,977,497 - 59,979,258 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1559,976,596 - 59,979,421 (-)NCBI
Celera556,333,084 - 56,336,654 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Arhgef39
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310376
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.