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Gene: Usp47 (ubiquitin specific peptidase 47) Rattus norvegicus
Symbol: Usp47
Name: ubiquitin specific peptidase 47
Description: Predicted to have WD40-repeat domain binding activity; cysteine-type endopeptidase activity; and thiol-dependent ubiquitin-specific protease activity. Predicted to be involved in several processes, including monoubiquitinated protein deubiquitination; negative regulation of apoptotic process; and positive regulation of canonical Wnt signaling pathway. Predicted to localize to SCF ubiquitin ligase complex; cytosol; and nucleus. Orthologous to human USP47 (ubiquitin specific peptidase 47); INTERACTS WITH 1,3-dinitrobenzene; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC308896; ubiquitin carboxyl-terminal hydrolase 47; ubiquitin specific protease 47
Homo sapiens (human) : USP47 (ubiquitin specific peptidase 47)  HGNC  Alliance
Mus musculus (house mouse) : Usp47 (ubiquitin specific peptidase 47)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp47 (ubiquitin specific peptidase 47)
Pan paniscus (bonobo/pygmy chimpanzee) : USP47 (ubiquitin specific peptidase 47)
Canis lupus familiaris (dog) : USP47 (ubiquitin specific peptidase 47)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp47 (ubiquitin specific peptidase 47)
Sus scrofa (pig) : USP47 (ubiquitin specific peptidase 47)
Chlorocebus sabaeus (African green monkey) : USP47 (ubiquitin specific peptidase 47)
Heterocephalus glaber (naked mole-rat) : Usp47 (ubiquitin specific peptidase 47)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01176,854,589 - 176,937,763 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1176,854,653 - 176,937,763 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01183,833,960 - 183,917,156 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41169,836,253 - 169,920,055 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11169,947,098 - 170,039,002 (+)NCBI
Celera1164,029,805 - 164,112,586 (+)NCBICelera
Cytogenetic Map1q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Usp47
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310411
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.