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Gene: Setd5 (SET domain containing 5) Rattus norvegicus
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Symbol: Setd5
Name: SET domain containing 5
Description: Predicted to have histone methyltransferase activity (H3-K9 specific). Predicted to be involved in covalent chromatin modification and regulation of histone acetylation. Predicted to colocalize with the Cdc73/Paf1 complex. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 23. Orthologous to human SETD5 (SET domain containing 5); INTERACTS WITH 3,3',5,5'-tetrabromobisphenol A; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC297514; RGD1310433; SET domain-containing protein 5; similar to mKIAA1757 protein
Orthologs:
Homo sapiens (human) : SETD5 (SET domain containing 5)  HGNC  Alliance
Mus musculus (house mouse) : Setd5 (SET domain containing 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Setd5 (SET domain containing 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SETD5 (SET domain containing 5)
Canis lupus familiaris (dog) : SETD5 (SET domain containing 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Setd5 (SET domain containing 5)
Sus scrofa (pig) : SETD5 (SET domain containing 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04145,017,549 - 145,095,247 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04208,315,923 - 208,393,604 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44148,949,819 - 149,027,459 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14149,194,804 - 149,272,302 (+)NCBI
Celera4134,776,438 - 134,854,033 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Setd5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310433
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.