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Gene: Syvn1 (synoviolin 1) Rattus norvegicus
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Symbol: Syvn1
Name: synoviolin 1
CRRD ID: 1310488
Description: Predicted to have several functions, including chaperone binding activity; enzyme binding activity; and unfolded protein binding activity. Predicted to be involved in several processes, including ERAD pathway; protein K48-linked ubiquitination; and protein stabilization. Predicted to localize to endoplasmic reticulum membrane; nucleoplasm; and smooth endoplasmic reticulum. Orthologous to human SYVN1 (synoviolin 1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 2,6-dinitrotoluene; 4-phenylbutyric acid; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase synoviolin; HRD1 protein; LOC361712; RGD1310488; similar to HRD1 protein; synovial apoptosis inhibitor 1, synoviolin; synoviolin
Orthologs:
Homo sapiens (human) : SYVN1 (synoviolin 1)  HGNC  Alliance
Mus musculus (house mouse) : Syvn1 (synovial apoptosis inhibitor 1, synoviolin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syvn1 (synoviolin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SYVN1 (synoviolin 1)
Canis lupus familiaris (dog) : SYVN1 (synoviolin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syvn1 (synoviolin 1)
Sus scrofa (pig) : SYVN1 (synoviolin 1)
Chlorocebus sabaeus (African green monkey) : SYVN1 (synoviolin 1)
Heterocephalus glaber (naked mole-rat) : Syvn1 (synoviolin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01221,409,281 - 221,416,229 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,409,271 - 221,417,886 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,344,759 - 228,351,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,684,460 - 208,690,978 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11208,837,919 - 208,844,428 (+)NCBI
Celera1200,873,320 - 200,879,838 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Syvn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310488
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.