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Gene: Arid1a (AT-rich interaction domain 1A) Rattus norvegicus
Symbol: Arid1a
Name: AT-rich interaction domain 1A
Description: Predicted to contribute to nucleosome binding activity. Predicted to be involved in several processes, including animal organ development; intracellular steroid hormone receptor signaling pathway; and regulation of transcription, DNA-templated. Predicted to localize to SWI/SNF superfamily-type complex and nucleoplasm. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome 2 and neuroblastoma. Orthologous to human ARID1A (AT-rich interaction domain 1A); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
Also known as: AT rich interactive domain 1A (SWI-like); AT rich interactive domain 1A (Swi1 like); AT-rich interactive domain-containing protein 1A; LOC297867
Homo sapiens (human) : ARID1A (AT-rich interaction domain 1A)  HGNC  Alliance
Mus musculus (house mouse) : Arid1a (AT rich interactive domain 1A (SWI-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arid1a (AT-rich interaction domain 1A)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100988406 (AT-rich interactive domain-containing protein 1A)
Canis lupus familiaris (dog) : ARID1A (AT-rich interaction domain 1A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid1a (AT-rich interaction domain 1A)
Sus scrofa (pig) : ARID1A (AT-rich interaction domain 1A)
Chlorocebus sabaeus (African green monkey) : ARID1A (AT-rich interaction domain 1A)
Heterocephalus glaber (naked mole-rat) : Arid1a (AT-rich interaction domain 1A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.05151,904,687 - 151,977,973 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5151,904,684 - 151,977,636 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05155,592,617 - 155,665,889 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45151,355,617 - 151,398,647 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15151,335,330 - 151,408,688 (+)NCBI
Celera5144,329,185 - 144,372,216 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Arid1a
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310500
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.