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Gene: Copa (COPI coat complex subunit alpha) Rattus norvegicus
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Symbol: Copa
Name: COPI coat complex subunit alpha
Description: Predicted to have mRNA binding activity. Predicted to be involved in several processes, including Golgi vesicle transport; pancreatic juice secretion; and protein localization to cell leading edge. Predicted to localize to cytoplasmic vesicle; extracellular space; and growth cone. Orthologous to human COPA (COPI coat complex subunit alpha); PARTICIPATES IN Arf family mediated signaling pathway; INTERACTS WITH bisphenol A; flutamide; gentamycin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: coatomer protein complex subunit alpha; coatomer subunit alpha; LOC304978
Orthologs:
Homo sapiens (human) : COPA (COPI coat complex subunit alpha)  HGNC  Alliance
Mus musculus (house mouse) : Copa (coatomer protein complex subunit alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Copa (COPI coat complex subunit alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : COPA (COPI coat complex subunit alpha)
Canis lupus familiaris (dog) : COPA (COPI coat complex subunit alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Copa (COPI coat complex subunit alpha)
Sus scrofa (pig) : COPA (COPI coat complex subunit alpha)
Chlorocebus sabaeus (African green monkey) : COPA (COPI coat complex subunit alpha)
Heterocephalus glaber (naked mole-rat) : Copa (COPI coat complex subunit alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01390,467,285 - 90,508,894 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1390,467,265 - 90,508,932 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01394,990,249 - 95,030,030 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41388,076,522 - 88,117,020 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11388,265,405 - 88,305,900 (+)NCBI
Celera1384,158,259 - 84,198,512 (+)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Copa
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310525
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.