Gene: Sema4d (semaphorin 4D) Rattus norvegicus
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Symbol: Sema4d
Name: semaphorin 4D
Description: Predicted to have identical protein binding activity, signaling receptor binding activity, and transmembrane signaling receptor activity; predicted to be involved in several processes, including animal organ development, negative regulation of cellular metabolic process, and regulation of cell morphogenesis; predicted to localize to the extracellular space and integral component of plasma membrane; orthologous to human SEMA4D (semaphorin 4D); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cocaine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC306790; sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D; semaphorin-4D
Orthologs:
Homo sapiens (human) : SEMA4D (semaphorin 4D)  HGNC  Alliance
Mus musculus (house mouse) : Sema4d (sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sema4d (semaphorin 4D)
Pan paniscus (bonobo/pygmy chimpanzee) : SEMA4D (semaphorin 4D)
Canis lupus familiaris (dog) : SEMA4D (semaphorin 4D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101975744 (semaphorin-4D)
Sus scrofa (pig) : SEMA4D (semaphorin 4D)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01713,516,276 - 13,538,513 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01715,590,977 - 15,613,214 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41719,352,632 - 19,373,179 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11719,332,919 - 19,373,283 (+)NCBI
Celera1713,255,006 - 13,277,562 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sema4d
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310554
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.