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Gene: Pdcd5 (programmed cell death 5) Rattus norvegicus
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Symbol: Pdcd5
Name: programmed cell death 5
CRRD ID: 1310561
Description: Predicted to have acetyltransferase activator activity; beta-tubulin binding activity; and heparin binding activity. Predicted to be involved in several processes, including negative regulation of chaperone-mediated protein folding; positive regulation of macromolecule metabolic process; and positive regulation of mitochondrion organization. Predicted to localize to cytosol and nucleus. Orthologous to human PDCD5 (programmed cell death 5); INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292814; programmed cell death protein 5
Orthologs:
Homo sapiens (human) : PDCD5 (programmed cell death 5)  HGNC  Alliance
Mus musculus (house mouse) : Pdcd5 (programmed cell death 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdcd5 (programmed cell death 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PDCD5 (programmed cell death 5)
Canis lupus familiaris (dog) : PDCD5 (programmed cell death 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdcd5 (programmed cell death 5)
Sus scrofa (pig) : PDCD5 (programmed cell death 5)
Chlorocebus sabaeus (African green monkey) : PDCD5 (programmed cell death 5)
Heterocephalus glaber (naked mole-rat) : Pdcd5 (programmed cell death 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0191,173,473 - 91,178,801 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl191,173,473 - 91,178,801 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl191,961,020 - 91,966,418 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0193,092,982 - 93,098,394 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4188,194,319 - 88,199,647 (-)NCBIRGSC3.4rn4RGSC3.4
Celera182,653,624 - 82,658,741 (-)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pdcd5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310561
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-10-06
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.