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Gene: Slc24a5 (solute carrier family 24 member 5) Rattus norvegicus
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Symbol: Slc24a5
Name: solute carrier family 24 member 5
Description: Predicted to have calcium channel activity and calcium, potassium:sodium antiporter activity. Predicted to be involved in several processes, including cellular calcium ion homeostasis; melanocyte differentiation; and negative regulation of melanin biosynthetic process. Predicted to localize to trans-Golgi network. Human ortholog(s) of this gene implicated in oculocutaneous albinism type VI. Orthologous to human SLC24A5 (solute carrier family 24 member 5); INTERACTS WITH amphetamine; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC311387; sodium/potassium/calcium exchanger 5; solute carrier family 24 (sodium/potassium/calcium exchanger), member 5; solute carrier family 24, member 5
Orthologs:
Homo sapiens (human) : SLC24A5 (solute carrier family 24 member 5)  HGNC  Alliance
Mus musculus (house mouse) : Slc24a5 (solute carrier family 24, member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc24a5 (solute carrier family 24 member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC24A5 (solute carrier family 24 member 5)
Canis lupus familiaris (dog) : SLC24A5 (solute carrier family 24 member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc24a5 (solute carrier family 24 member 5)
Sus scrofa (pig) : SLC24A5 (solute carrier family 24 member 5)
Chlorocebus sabaeus (African green monkey) : SLC24A5 (solute carrier family 24 member 5)
Heterocephalus glaber (naked mole-rat) : Slc24a5 (solute carrier family 24 member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03117,335,212 - 117,354,480 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3117,335,212 - 117,354,480 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03123,859,070 - 123,878,338 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43112,368,177 - 112,387,444 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13112,228,292 - 112,292,568 (+)NCBI
Celera3111,178,214 - 111,197,484 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc24a5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310565
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-05-05
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.