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Gene: Tpgs2 (tubulin polyglutamylase complex subunit 2) Rattus norvegicus
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Symbol: Tpgs2
Name: tubulin polyglutamylase complex subunit 2
Description: Predicted to be involved in protein polyglutamylation. Predicted to localize to cytoplasm and microtubule. Orthologous to human TPGS2 (tubulin polyglutamylase complex subunit 2); INTERACTS WITH (+)-schisandrin B; decabromodiphenyl ether; tetrachloromethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC361301; Pgs2; RGD1310571; similar to hypothetical protein
Orthologs:
Homo sapiens (human) : TPGS2 (tubulin polyglutamylase complex subunit 2)  HGNC  Alliance
Mus musculus (house mouse) : Tpgs2 (tubulin polyglutamylase complex subunit 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tpgs2 (tubulin polyglutamylase complex subunit 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TPGS2 (tubulin polyglutamylase complex subunit 2)
Canis lupus familiaris (dog) : TPGS2 (tubulin polyglutamylase complex subunit 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tpgs2 (tubulin polyglutamylase complex subunit 2)
Sus scrofa (pig) : TPGS2 (tubulin polyglutamylase complex subunit 2)
Chlorocebus sabaeus (African green monkey) : TPGS2 (tubulin polyglutamylase complex subunit 2)
Heterocephalus glaber (naked mole-rat) : Tpgs2 (tubulin polyglutamylase complex subunit 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01817,339,033 - 17,396,886 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1817,339,033 - 17,396,886 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01817,093,464 - 17,150,888 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41816,959,252 - 16,999,878 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11816,985,897 - 17,026,519 (-)NCBI
Celera1816,343,298 - 16,400,482 (-)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tpgs2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310571
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.