Gene: Cic (capicua transcriptional repressor) Rattus norvegicus
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Symbol: Cic
Name: capicua transcriptional repressor
Description: Predicted to have chromatin binding activity; predicted to be involved in several processes, including animal organ development, learning or memory, and negative regulation of transcription by RNA polymerase II; predicted to localize to the nucleoplasm and protein-containing complex; orthologous to human CIC (capicua transcriptional repressor); INTERACTS WITH bisphenol A; flutamide; gentamycin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: capicua homolog; capicua homolog (Drosophila); LOC308435; LOW QUALITY PROTEIN: protein capicua homolog
Orthologs:
Homo sapiens (human) : CIC (capicua transcriptional repressor)  HGNC  Alliance
Mus musculus (house mouse) : Cic (capicua transcriptional repressor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cic (capicua transcriptional repressor)
Pan paniscus (bonobo/pygmy chimpanzee) : CIC (capicua transcriptional repressor)
Canis lupus familiaris (dog) : CIC (capicua transcriptional repressor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cic (capicua transcriptional repressor)
Sus scrofa (pig) : CIC (capicua transcriptional repressor)
more info ...
Is Marker For: Strains:   WAG.OXYS-(D1Rat30-D1Rat219)/Nov  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0182,135,440 - 82,163,007 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0183,415,451 - 83,427,167 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4180,558,096 - 80,569,432 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1180,636,166 - 80,647,543 (+)NCBI
Celera175,296,049 - 75,323,445 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cic
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310706
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.