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Gene: Hdac9 (histone deacetylase 9) Rattus norvegicus
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Symbol: Hdac9
Name: histone deacetylase 9
Description: Predicted to have several functions, including enzyme binding activity; histone deacetylase activity (H4-K16 specific); and transcription corepressor activity. Involved in neuron differentiation and response to amphetamine. Localizes to the nucleus. Biomarker of middle cerebral artery infarction. Orthologous to human HDAC9 (histone deacetylase 9); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC314040; LOC500642; RGD1310748; RGD1563092; similar to histone deacetylase 9 isoform 5; similar to histone deacetylase-related protein; similar to histone decetylase 9b
Orthologs:
Homo sapiens (human) : HDAC9 (histone deacetylase 9)  HGNC  Alliance
Mus musculus (house mouse) : Hdac9 (histone deacetylase 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hdac9 (histone deacetylase 9)
Pan paniscus (bonobo/pygmy chimpanzee) : HDAC9 (histone deacetylase 9)
Canis lupus familiaris (dog) : HDAC9 (histone deacetylase 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hdac9 (histone deacetylase 9)
Sus scrofa (pig) : HDAC9 (histone deacetylase 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0653,487,367 - 54,358,694 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0663,109,688 - 63,978,416 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4653,066,308 - 53,114,402 (-)NCBIRGSC3.4rn4RGSC3.4
Celera649,930,173 - 50,491,018 (-)NCBICelera
Cytogenetic Map6q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Hdac9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310748
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.