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Gene: Cnot6 (CCR4-NOT transcription complex, subunit 6) Rattus norvegicus
Symbol: Cnot6
Name: CCR4-NOT transcription complex, subunit 6
Description: Predicted to have poly(A)-specific ribonuclease activity. Predicted to be involved in several processes, including nuclear-transcribed mRNA catabolic process; positive regulation of cytoplasmic mRNA processing body assembly; and positive regulation of nuclear receptor transcription coactivator activity. Predicted to localize to CCR4-NOT complex; cytoplasm; and nucleus. Orthologous to human CNOT6 (CCR4-NOT transcription complex subunit 6); PARTICIPATES IN microRNA pathway; RNA degradation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2-methoxyethanol.
Type: protein-coding
Also known as: carbon catabolite repressor protein 4 homolog; CCR4; CCR4 carbon catabolite repression 4-like; CCR4-NOT transcription complex subunit 6; cytoplasmic deadenylase; LOC287249; RGD1310783; similar to CCR4
Homo sapiens (human) : CNOT6 (CCR4-NOT transcription complex subunit 6)  HGNC  Alliance
Mus musculus (house mouse) : Cnot6 (CCR4-NOT transcription complex, subunit 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cnot6 (CCR4-NOT transcription complex subunit 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CNOT6 (CCR4-NOT transcription complex subunit 6)
Canis lupus familiaris (dog) : CNOT6 (CCR4-NOT transcription complex subunit 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cnot6 (CCR4-NOT transcription complex subunit 6)
Sus scrofa (pig) : CNOT6 (CCR4-NOT transcription complex subunit 6)
Chlorocebus sabaeus (African green monkey) : CNOT6 (CCR4-NOT transcription complex subunit 6)
Heterocephalus glaber (naked mole-rat) : Cnot6 (CCR4-NOT transcription complex subunit 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01035,144,291 - 35,195,126 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1035,146,337 - 35,187,416 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01034,916,148 - 34,967,236 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41035,139,386 - 35,192,631 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11035,140,437 - 35,193,680 (-)NCBI
Celera1033,337,338 - 33,387,801 (-)NCBICelera
Cytogenetic Map10q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Cnot6
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310783
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.