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Gene: Abt1 (activator of basal transcription 1) Rattus norvegicus
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Symbol: Abt1
Name: activator of basal transcription 1
Description: Predicted to have RNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II; ribosomal small subunit biogenesis; and spinal cord motor neuron differentiation. Predicted to localize to the nucleolus and transcription factor complex. Orthologous to human ABT1 (activator of basal transcription 1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC306960; MGC116249
Orthologs:
Homo sapiens (human) : ABT1 (activator of basal transcription 1)  HGNC  Alliance
Mus musculus (house mouse) : Abt1 (activator of basal transcription 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abt1 (activator of basal transcription 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ABT1 (activator of basal transcription 1)
Canis lupus familiaris (dog) : ABT1 (activator of basal transcription 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abt1 (activator of basal transcription 1)
Sus scrofa (pig) : ABT1 (activator of basal transcription 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01743,946,118 - 43,948,224 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01745,800,799 - 45,802,896 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,901,759 - 48,903,853 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11748,903,825 - 48,906,661 (+)NCBI
Celera1741,329,917 - 41,332,011 (+)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Abt1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310785
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.