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Gene: Ankrd42 (ankyrin repeat domain 42) Rattus norvegicus
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Symbol: Ankrd42
Name: ankyrin repeat domain 42
Description: Predicted to have NF-kappaB binding activity. Predicted to be involved in positive regulation of NF-kappaB transcription factor activity and positive regulation of cytokine production involved in inflammatory response. Predicted to localize to the nucleus. Orthologous to human ANKRD42 (ankyrin repeat domain 42); INTERACTS WITH (RS)-amphetamine; 2,4-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ankyrin repeat domain-containing protein 42; LOC293117; RGD1310789; similar to RIKEN cDNA 4933417L02
Orthologs:
Homo sapiens (human) : ANKRD42 (ankyrin repeat domain 42)  HGNC  Alliance
Mus musculus (house mouse) : Ankrd42 (ankyrin repeat domain 42)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ankrd42 (ankyrin repeat domain 42)
Pan paniscus (bonobo/pygmy chimpanzee) : ANKRD42 (ankyrin repeat domain 42)
Canis lupus familiaris (dog) : ANKRD42 (ankyrin repeat domain 42)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ankrd42 (ankyrin repeat domain 42)
Sus scrofa (pig) : ANKRD42 (ankyrin repeat domain 42)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01157,419,117 - 157,461,588 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01163,663,265 - 163,705,736 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41149,425,862 - 149,468,863 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11149,504,267 - 149,547,255 (-)NCBI
Celera1144,827,522 - 144,870,651 (-)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ankrd42
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310789
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.