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Gene: Ebf2 (EBF transcription factor 2) Rattus norvegicus
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Symbol: Ebf2
Name: EBF transcription factor 2
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II proximal promoter sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including brown fat cell differentiation; positive regulation of chromatin binding activity; and positive regulation of cold-induced thermogenesis. Predicted to localize to the nucleus. Orthologous to human EBF2 (EBF transcription factor 2); INTERACTS WITH atrazine; endosulfan; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: early B-cell factor 2; LOC361060; transcription factor COE2
Orthologs:
Homo sapiens (human) : EBF2 (EBF transcription factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Ebf2 (early B cell factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ebf2 (EBF transcription factor 2)
Canis lupus familiaris (dog) : EBF2 (EBF transcription factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ebf2 (EBF transcription factor 2)
Sus scrofa (pig) : EBF2 (EBF transcription factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01543,905,099 - 44,103,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01547,492,258 - 47,690,729 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41546,779,220 - 46,977,125 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11546,796,369 - 46,991,761 (+)NCBI
Celera1541,100,921 - 41,298,980 (+)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ebf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310805
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.