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Gene: Rpgrip1 (RPGR interacting protein 1) Rattus norvegicus
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Symbol: Rpgrip1
Name: RPGR interacting protein 1
Description: Predicted to be involved in detection of light stimulus involved in visual perception; eye development; and neural precursor cell proliferation. Localizes to the ciliary rootlet and ciliary transition zone. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 6; Leber hereditary optic neuropathy; cone-rod dystrophy 13; and retinitis pigmentosa. Orthologous to human RPGRIP1 (RPGR interacting protein 1); INTERACTS WITH (RS)-amphetamine; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC305850; MGC114442; retinitis pigmentosa GTPase regulator interacting protein 1; X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Orthologs:
Homo sapiens (human) : RPGRIP1 (RPGR interacting protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Rpgrip1 (retinitis pigmentosa GTPase regulator interacting protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rpgrip1 (RPGR interacting protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : RPGRIP1 (RPGR interacting protein 1)
Canis lupus familiaris (dog) : RPGRIP1 (RPGR interacting protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rpgrip1 (RPGR interacting protein 1)
Sus scrofa (pig) : RPGRIP1 (RPGR interacting protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01528,521,287 - 28,575,046 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01532,331,555 - 32,385,312 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41527,574,762 - 27,582,641 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11527,590,461 - 27,594,562 (+)NCBI
Celera1525,116,975 - 25,171,719 (+)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Rpgrip1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310807
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.