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Gene: Trim6 (tripartite motif containing 6) Rattus norvegicus
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Symbol: Trim6
Name: tripartite motif containing 6
Description: Predicted to have several functions, including protein homodimerization activity; protein tyrosine kinase binding activity; and ubiquitin protein ligase activity. Predicted to be involved in several processes, including positive regulation of cell communication; positive regulation of protein phosphorylation; and regulation of viral life cycle. Predicted to localize to cytosol and nucleus. Orthologous to human TRIM6 (tripartite motif containing 6); INTERACTS WITH 17beta-estradiol; acetamide; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC293294; tripartite motif protein 6; tripartite motif-containing 6; tripartite motif-containing protein 6
Orthologs:
Homo sapiens (human) : TRIM6 (tripartite motif containing 6)  HGNC  Alliance
Mus musculus (house mouse) : Trim6 (tripartite motif-containing 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim6 (tripartite motif containing 6)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM6 (tripartite motif containing 6)
Canis lupus familiaris (dog) : TRIM6 (tripartite motif containing 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim6 (tripartite motif containing 6)
Chlorocebus sabaeus (African green monkey) : TRIM6 (tripartite motif containing 6)
Heterocephalus glaber (naked mole-rat) : Trim6 (tripartite motif containing 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01169,410,084 - 169,423,305 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1169,410,115 - 169,423,283 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,550,133 - 175,563,346 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41162,059,220 - 162,094,672 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11162,180,654 - 162,187,805 (+)NCBI
Celera1156,680,750 - 156,687,600 (+)NCBICelera
Cytogenetic Map1q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310896
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.