Gene: Clasp1 (cytoplasmic linker associated protein 1) Rattus norvegicus
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Symbol: Clasp1
Name: cytoplasmic linker associated protein 1
Description: Predicted to have dystroglycan binding activity, kinetochore binding activity, and microtubule plus-end binding activity; predicted to be involved in several processes, including microtubule cytoskeleton organization, negative regulation of cellular component organization, and positive regulation of extracellular matrix organization; predicted to colocalize with the focal adhesion; orthologous to human CLASP1 (cytoplasmic linker associated protein 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: CLIP-associating protein 1; LOC304740
Orthologs:
Homo sapiens (human) : CLASP1 (cytoplasmic linker associated protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Clasp1 (CLIP associating protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clasp1 (cytoplasmic linker associated protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLASP1 (cytoplasmic linker associated protein 1)
Canis lupus familiaris (dog) : CLASP1 (cytoplasmic linker associated protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clasp1 (cytoplasmic linker associated protein 1)
Sus scrofa (pig) : CLASP1 (cytoplasmic linker associated protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01334,365,038 - 34,584,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01339,495,368 - 39,713,144 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41331,046,104 - 31,269,294 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11331,048,529 - 31,269,668 (+)NCBI
Celera1329,397,118 - 29,618,675 (+)NCBICelera
Cytogenetic Map13q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Clasp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310970
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.