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Gene: Pde12 (phosphodiesterase 12) Rattus norvegicus
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Symbol: Pde12
Name: phosphodiesterase 12
Description: Predicted to have 3'-5'-exoribonuclease activity. Predicted to be involved in several processes, including RNA metabolic process; cellular response to cytokine stimulus; and regulation of mitochondrial mRNA stability. Predicted to localize to the mitochondrial matrix. Orthologous to human PDE12 (phosphodiesterase 12); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 2',5'-phosphodiesterase 12; 2'-PDE; 2-PDE; LOC306231; LRRGT00074; mitochondrial deadenylase; RGD1310975; similar to CG31759-PA
Orthologs:
Homo sapiens (human) : PDE12 (phosphodiesterase 12)  HGNC  Alliance
Mus musculus (house mouse) : Pde12 (phosphodiesterase 12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pde12 (phosphodiesterase 12)
Pan paniscus (bonobo/pygmy chimpanzee) : PDE12 (phosphodiesterase 12)
Canis lupus familiaris (dog) : PDE12 (phosphodiesterase 12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pde12 (phosphodiesterase 12)
Sus scrofa (pig) : PDE12 (phosphodiesterase 12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0162,357,028 - 2,367,069 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl162,357,028 - 2,367,253 (-)Ensembl
Rnor_5.0162,332,374 - 2,343,524 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4161,974,440 - 1,984,481 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1161,980,152 - 1,984,665 (-)NCBI
Celera161,884,218 - 1,894,257 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pde12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310975
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.