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Gene: Tet1 (tet methylcytosine dioxygenase 1) Rattus norvegicus
Symbol: Tet1
Name: tet methylcytosine dioxygenase 1
Description: Predicted to have DNA binding activity; iron ion binding activity; and methylcytosine dioxygenase activity. Predicted to be involved in several processes, including 5-methylcytosine catabolic process; inner cell mass cell differentiation; and regulation of nucleobase-containing compound metabolic process. Predicted to localize to the nucleus. Orthologous to human TET1 (tet methylcytosine dioxygenase 1); PARTICIPATES IN DNA modification pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; amphetamine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: CXXC finger 6; Cxxc6; LOC309902; LOW QUALITY PROTEIN: methylcytosine dioxygenase TET1; methylcytosine dioxygenase TET1; tet oncogene 1
Homo sapiens (human) : TET1 (tet methylcytosine dioxygenase 1)  HGNC  Alliance
Mus musculus (house mouse) : Tet1 (tet methylcytosine dioxygenase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tet1 (tet methylcytosine dioxygenase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TET1 (tet methylcytosine dioxygenase 1)
Canis lupus familiaris (dog) : TET1 (tet methylcytosine dioxygenase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tet1 (tet methylcytosine dioxygenase 1)
Sus scrofa (pig) : TET1 (tet methylcytosine dioxygenase 1)
Chlorocebus sabaeus (green monkey) : TET1 (tet methylcytosine dioxygenase 1)
Heterocephalus glaber (naked mole-rat) : Tet1 (tet methylcytosine dioxygenase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.02027,359,122 - 27,438,039 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2027,366,213 - 27,437,427 (+)Ensembl
Rnor_5.02029,200,519 - 29,267,971 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42025,131,169 - 25,155,785 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12025,145,587 - 25,220,858 (-)NCBI
Celera2027,057,215 - 27,136,909 (+)NCBICelera
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Tet1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310993
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-01-14
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.