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Gene: Pitrm1 (pitrilysin metallopeptidase 1) Rattus norvegicus
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Symbol: Pitrm1
Name: pitrilysin metallopeptidase 1
Description: Predicted to have metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to localize to mitochondrial matrix. Orthologous to human PITRM1 (pitrilysin metallopeptidase 1); INTERACTS WITH 4-amino-2,6-dinitrotoluene; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC307081; pitrilysin metallepetidase 1; pitrilysin metalloprotease 1; presequence protease, mitochondrial
Orthologs:
Homo sapiens (human) : PITRM1 (pitrilysin metallopeptidase 1)  HGNC  Alliance
Mus musculus (house mouse) : Pitrm1 (pitrilysin metallepetidase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pitrm1 (pitrilysin metallopeptidase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PITRM1 (pitrilysin metallopeptidase 1)
Canis lupus familiaris (dog) : PITRM1 (pitrilysin metallopeptidase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pitrm1 (pitrilysin metallopeptidase 1)
Sus scrofa (pig) : PITRM1 (pitrilysin metallopeptidase 1)
Chlorocebus sabaeus (African green monkey) : PITRM1 (pitrilysin metallopeptidase 1)
Heterocephalus glaber (naked mole-rat) : Pitrm1 (pitrilysin metallopeptidase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01768,477,423 - 68,509,113 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1768,477,446 - 68,509,120 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01770,194,206 - 70,225,894 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41774,824,700 - 74,856,784 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11774,835,838 - 74,867,610 (-)NCBI
Celera1763,393,689 - 63,425,141 (-)NCBICelera
Cytogenetic Map17q12.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pitrm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310998
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.