Gene: Cadm1 (cell adhesion molecule 1) Rattus norvegicus
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Symbol: Cadm1
Name: cell adhesion molecule 1
Description: Exhibits cell adhesion molecule binding activity; involved in brain development and liver development; localizes to the neuron projection, plasma membrane, and postsynaptic density; biomarker of hepatocellular carcinoma and lung adenocarcinoma; orthologous to human CADM1 (cell adhesion molecule 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Igsf4; Igsf4a; immunoglobulin superfamily, member 4; immunoglobulin superfamily, member 4A; LOC363058; Necl-2; nectin-like protein 2; secretory isoform of TSLC1; sgigsf; spermatogenic immunoglobulin superfamily; synaptic cell adhesion molecule; SynCAM; TSLC-1; TSLC1; tumor suppressor in lung cancer 1 homolog
Orthologs:
Homo sapiens (human) : CADM1 (cell adhesion molecule 1)  HGNC  Alliance
Mus musculus (house mouse) : Cadm1 (cell adhesion molecule 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cadm1 (cell adhesion molecule 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CADM1 (cell adhesion molecule 1)
Canis lupus familiaris (dog) : CADM1 (cell adhesion molecule 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cadm1 (cell adhesion molecule 1)
Sus scrofa (pig) : CADM1 (cell adhesion molecule 1)
more info ...
Allele / Splice: Cadm1Tn(sb-T2/Bart3)2.229Mcwi  
Genetic Models: F344-Cadm1Tn(sb-T2/Bart3)2.229Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0851,858,906 - 52,200,591 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0850,460,752 - 50,796,128 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4850,765,645 - 51,108,962 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1850,784,698 - 51,128,015 (+)NCBI
Celera847,421,398 - 47,739,897 (+)NCBICelera
Cytogenetic Map8q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cadm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1310999
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.