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Gene: Ift52 (intraflagellar transport 52) Rattus norvegicus
Symbol: Ift52
Name: intraflagellar transport 52
Description: Predicted to be involved in several processes, including cilium organization; embryonic morphogenesis; and smoothened signaling pathway. Predicted to localize to several cellular components, including ciliary base; ciliary tip; and microtubule organizing center. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy. Orthologous to human IFT52 (intraflagellar transport 52); INTERACTS WITH bisphenol A; dibutyl phthalate; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: intraflagellar transport 52 homolog; intraflagellar transport 52 homolog (Chlamydomonas); intraflagellar transport protein 52 homolog; LOC362265; RGD1311004; similar to NGD5 protein homolog (CGI-53)
Homo sapiens (human) : IFT52 (intraflagellar transport 52)  HGNC  Alliance
Mus musculus (house mouse) : Ift52 (intraflagellar transport 52)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift52 (intraflagellar transport 52)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT52 (intraflagellar transport 52)
Canis lupus familiaris (dog) : IFT52 (intraflagellar transport 52)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift52 (intraflagellar transport 52)
Sus scrofa (pig) : IFT52 (intraflagellar transport 52)
Chlorocebus sabaeus (African green monkey) : IFT52 (intraflagellar transport 52)
Heterocephalus glaber (naked mole-rat) : Ift52 (intraflagellar transport 52)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.03159,388,868 - 159,413,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3159,392,193 - 159,413,575 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03165,584,941 - 165,608,881 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43153,896,459 - 153,917,600 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13153,799,163 - 153,822,888 (+)NCBI
Celera3150,329,846 - 150,354,351 (+)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Ift52
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311004
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.