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Gene: Mbd6 (methyl-CpG binding domain protein 6) Rattus norvegicus
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Symbol: Mbd6
Name: methyl-CpG binding domain protein 6
Description: Predicted to have chromatin binding activity. Predicted to localize to chromocenter; fibrillar center; and nucleoplasm. Human ortholog(s) of this gene implicated in autism spectrum disorder. Orthologous to human MBD6 (methyl-CpG binding domain protein 6); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC102553371; LOC362892; methyl-CpG-binding domain protein 6; WAS/WASL-interacting protein family member 1-like
Orthologs:
Homo sapiens (human) : MBD6 (methyl-CpG binding domain protein 6)  HGNC  Alliance
Mus musculus (house mouse) : Mbd6 (methyl-CpG binding domain protein 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mbd6 (methyl-CpG binding domain protein 6)
Pan paniscus (bonobo/pygmy chimpanzee) : MBD6 (methyl-CpG binding domain protein 6)
Canis lupus familiaris (dog) : MBD6 (methyl-CpG binding domain protein 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mbd6 (methyl-CpG binding domain protein 6)
Sus scrofa (pig) : MBD6 (methyl-CpG binding domain protein 6)
Chlorocebus sabaeus (African green monkey) : MBD6 (methyl-CpG binding domain protein 6)
Heterocephalus glaber (naked mole-rat) : Mbd6 (methyl-CpG binding domain protein 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0770,571,435 - 70,580,146 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,571,435 - 70,577,147 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,745,585 - 70,752,317 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,239,304 - 67,245,037 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1767,260,033 - 67,265,767 (-)NCBI
Celera760,248,101 - 60,253,813 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Mbd6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311050
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.