Gene: Ndnf (neuron-derived neurotrophic factor) Rattus norvegicus
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Symbol: Ndnf
Name: neuron-derived neurotrophic factor
Description: Predicted to have heparin binding activity; predicted to be involved in several processes, including cellular response to hypoxia, generation of neurons, and negative regulation of cell death; predicted to localize to the extracellular matrix; orthologous to human NDNF (neuron derived neurotrophic factor); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,2',4,4'-Tetrabromodiphenyl ether; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC312401; LOW QUALITY PROTEIN: protein NDNF; RGD1311080; similar to RIKEN cDNA A930038C07
Orthologs:
Homo sapiens (human) : NDNF (neuron derived neurotrophic factor)  HGNC  Alliance
Mus musculus (house mouse) : Ndnf (neuron-derived neurotrophic factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ndnf (neuron derived neurotrophic factor)
Pan paniscus (bonobo/pygmy chimpanzee) : NDNF (neuron derived neurotrophic factor)
Canis lupus familiaris (dog) : NDNF (neuron derived neurotrophic factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ndnf (neuron derived neurotrophic factor)
Sus scrofa (pig) : NDNF (neuron derived neurotrophic factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0496,528,830 - 96,565,780 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04161,312,929 - 161,350,269 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4495,313,453 - 95,350,122 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1495,362,576 - 95,593,810 (+)NCBI
Celera489,680,807 - 89,717,405 (+)NCBICelera
Cytogenetic Map4q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ndnf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311080
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.