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Gene: Atp6v1c1 (ATPase H+ transporting V1 subunit C1) Rattus norvegicus
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Symbol: Atp6v1c1
Name: ATPase H+ transporting V1 subunit C1
Description: Predicted to have proton-exporting ATPase activity, phosphorylative mechanism and proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Localizes to apical part of cell; cytoplasmic vesicle; and plasma membrane. Orthologous to human ATP6V1C1 (ATPase H+ transporting V1 subunit C1); PARTICIPATES IN oxidative phosphorylation pathway; phagocytosis pathway; rheumatoid arthritis pathway; INTERACTS WITH amphetamine; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, H+ transporting, lysosomal V1 subunit C1; ATPase, H+ transporting, V1 subunit C, isoform 1; LOC299971; MGC109315; V-ATPase subunit C 1; V-type proton ATPase subunit C 1; vacuolar proton pump subunit C 1
Orthologs:
Homo sapiens (human) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)  HGNC  Alliance
Mus musculus (house mouse) : Atp6v1c1 (ATPase, H+ transporting, lysosomal V1 subunit C1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp6v1c1 (ATPase H+ transporting V1 subunit C1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
Canis lupus familiaris (dog) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp6v1c1 (ATPase H+ transporting V1 subunit C1)
Sus scrofa (pig) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
Chlorocebus sabaeus (African green monkey) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
Heterocephalus glaber (naked mole-rat) : Atp6v1c1 (ATPase H+ transporting V1 subunit C1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0777,678,853 - 77,716,658 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,678,968 - 77,716,408 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0778,536,306 - 78,574,105 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4774,341,301 - 74,378,806 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1774,362,030 - 74,399,537 (+)NCBI
Celera766,891,594 - 66,929,033 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp6v1c1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311082
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.