Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Arid2 (AT-rich interaction domain 2) Rattus norvegicus
Symbol: Arid2
Name: AT-rich interaction domain 2
Description: Predicted to have DNA binding activity. Predicted to be involved in several processes, including heart development; nucleosome disassembly; and positive regulation of double-strand break repair via homologous recombination. Predicted to localize to nucleoplasm and plasma membrane. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome 6. Orthologous to human ARID2 (AT-rich interaction domain 2); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: AT rich interactive domain 2 (Arid-rfx like); AT-rich interactive domain-containing protein 2; LOC366980
Homo sapiens (human) : ARID2 (AT-rich interaction domain 2)  HGNC  Alliance
Mus musculus (house mouse) : Arid2 (AT rich interactive domain 2 (ARID, RFX-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arid2 (AT-rich interaction domain 2)
Pan paniscus (bonobo/pygmy chimpanzee) : ARID2 (AT-rich interaction domain 2)
Canis lupus familiaris (dog) : ARID2 (AT-rich interaction domain 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid2 (AT-rich interaction domain 2)
Sus scrofa (pig) : ARID2 (AT-rich interaction domain 2)
Chlorocebus sabaeus (African green monkey) : ARID2 (AT-rich interaction domain 2)
Heterocephalus glaber (naked mole-rat) : Arid2 (AT-rich interaction domain 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.07137,680,564 - 137,798,329 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7137,680,530 - 137,795,655 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07137,312,585 - 137,430,353 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47134,959,992 - 135,077,477 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17135,036,399 - 135,153,718 (+)NCBI
Celera7123,951,414 - 124,071,020 (+)NCBICelera
Cytogenetic Map7q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Arid2
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311105
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.