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Gene: Ddx49 (DEAD-box helicase 49) Rattus norvegicus
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Symbol: Ddx49
Name: DEAD-box helicase 49
Description: Predicted to have RNA binding activity. Predicted to be involved in rRNA processing. Predicted to localize to the nucleus. Orthologous to human DDX49 (DEAD-box helicase 49); INTERACTS WITH (+)-schisandrin B; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; LOC290660; probable ATP-dependent RNA helicase DDX49
Orthologs:
Homo sapiens (human) : DDX49 (DEAD-box helicase 49)  HGNC  Alliance
Mus musculus (house mouse) : Ddx49 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 49)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx49 (DEAD-box helicase 49)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX49 (DEAD-box helicase 49)
Canis lupus familiaris (dog) : DDX49 (DEAD-box helicase 49)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx49 (DEAD-box helicase 49)
Sus scrofa (pig) : DDX49 (DEAD-box helicase 49)
Chlorocebus sabaeus (African green monkey) : DDX49 (DEAD-box helicase 49)
Heterocephalus glaber (naked mole-rat) : Ddx49 (DEAD-box helicase 49)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01620,873,585 - 20,881,312 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,873,642 - 20,881,439 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,725,435 - 20,733,085 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,609,670 - 19,617,320 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11619,609,685 - 19,617,247 (+)NCBI
Celera1619,315,664 - 19,323,314 (+)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ddx49
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311124
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.