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Gene: Sephs1 (selenophosphate synthetase 1) Rattus norvegicus
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Symbol: Sephs1
Name: selenophosphate synthetase 1
Description: Predicted to have protein heterodimerization activity; protein homodimerization activity; and selenide, water dikinase activity. Predicted to be involved in selenocysteine biosynthetic process. Predicted to localize to cytoplasm; nuclear membrane; and plasma membrane. Orthologous to human SEPHS1 (selenophosphate synthetase 1); PARTICIPATES IN selenoamino acid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC291314; selenide, water dikinase 1
Orthologs:
Homo sapiens (human) : SEPHS1 (selenophosphate synthetase 1)  HGNC  Alliance
Mus musculus (house mouse) : Sephs1 (selenophosphate synthetase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sephs1 (selenophosphate synthetase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SEPHS1 (selenophosphate synthetase 1)
Canis lupus familiaris (dog) : SEPHS1 (selenophosphate synthetase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sephs1 (selenophosphate synthetase 1)
Sus scrofa (pig) : SEPHS1 (selenophosphate synthetase 1)
Chlorocebus sabaeus (African green monkey) : SEPHS1 (selenophosphate synthetase 1)
Heterocephalus glaber (naked mole-rat) : Sephs1 (selenophosphate synthetase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01777,312,562 - 77,340,934 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1777,312,562 - 77,340,934 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01778,978,379 - 79,006,698 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41784,443,153 - 84,473,434 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11784,456,080 - 84,484,517 (-)NCBI
Celera1772,795,028 - 72,823,505 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sephs1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311182
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.