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Gene: Vps13b (vacuolar protein sorting 13 homolog B) Rattus norvegicus
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Symbol: Vps13b
Name: vacuolar protein sorting 13 homolog B
Description: Orthologous to human VPS13B (vacuolar protein sorting 13 homolog B); INTERACTS WITH (+)-schisandrin B; (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Coh1; Cohen syndrome homolog 1; Cohh1; LOC315036; vacuolar protein sorting 13 homolog B (yeast); vacuolar protein sorting-associated protein 13B
Orthologs:
Homo sapiens (human) : VPS13B (vacuolar protein sorting 13 homolog B)  HGNC  Alliance
Mus musculus (house mouse) : Vps13b (vacuolar protein sorting 13B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps13b (vacuolar protein sorting 13 homolog B)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS13B (vacuolar protein sorting 13 homolog B)
Canis lupus familiaris (dog) : VPS13B (vacuolar protein sorting 13 homolog B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps13b (vacuolar protein sorting 13 homolog B)
Sus scrofa (pig) : VPS13B (vacuolar protein sorting 13 homolog B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0774,118,834 - 74,722,341 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0774,281,753 - 74,879,196 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4770,839,616 - 71,464,951 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1770,860,765 - 71,486,400 (+)NCBI
Celera763,647,181 - 64,211,271 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Vps13b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311183
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.