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Gene: Smc6 (structural maintenance of chromosomes 6) Rattus norvegicus
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Symbol: Smc6
Name: structural maintenance of chromosomes 6
Description: Predicted to have ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including cellular senescence; positive regulation of chromosome segregation; and telomere maintenance via recombination. Predicted to localize to the chromosome and nucleoplasm. Orthologous to human SMC6 (structural maintenance of chromosomes 6); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC313961; SMC6 structural maintenance of chromosomes 6-like 1; SMC6 structural maintenance of chromosomes 6-like 1 (yeast); Smc6l1; structural maintenance of chromosomes protein 6
Orthologs:
Homo sapiens (human) : SMC6 (structural maintenance of chromosomes 6)  HGNC  Alliance
Mus musculus (house mouse) : Smc6 (structural maintenance of chromosomes 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smc6 (structural maintenance of chromosomes 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SMC6 (structural maintenance of chromosomes 6)
Canis lupus familiaris (dog) : SMC6 (structural maintenance of chromosomes 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smc6 (structural maintenance of chromosomes 6)
Sus scrofa (pig) : SMC6 (structural maintenance of chromosomes 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0636,941,233 - 36,995,920 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0646,691,346 - 46,746,033 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4634,710,177 - 34,763,158 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1634,718,849 - 34,765,945 (+)NCBI
Celera633,379,218 - 33,432,201 (+)NCBICelera
Cytogenetic Map6q15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smc6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311214
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.