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Gene: Ltn1 (listerin E3 ubiquitin protein ligase 1) Rattus norvegicus
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Symbol: Ltn1
Name: listerin E3 ubiquitin protein ligase 1
Description: Predicted to have ribosomal large subunit binding activity and ubiquitin protein ligase activity. Predicted to be involved in protein autoubiquitination; rescue of stalled ribosome; and ribosome-associated ubiquitin-dependent protein catabolic process. Predicted to localize to the RQC complex and cytosol. Orthologous to human LTN1 (listerin E3 ubiquitin protein ligase 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: E3 ubiquitin-protein ligase listerin; LOC288308; ring finger protein 160; Rnf160; Zfp294; zinc finger protein 294; Znf294
Orthologs:
Homo sapiens (human) : LTN1 (listerin E3 ubiquitin protein ligase 1)  HGNC  Alliance
Mus musculus (house mouse) : Ltn1 (listerin E3 ubiquitin protein ligase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ltn1 (listerin E3 ubiquitin protein ligase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LTN1 (listerin E3 ubiquitin protein ligase 1)
Canis lupus familiaris (dog) : LTN1 (listerin E3 ubiquitin protein ligase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ltn1 (listerin E3 ubiquitin protein ligase 1)
Sus scrofa (pig) : LTN1 (listerin E3 ubiquitin protein ligase 1)
Chlorocebus sabaeus (African green monkey) : LTN1 (listerin E3 ubiquitin protein ligase 1)
Heterocephalus glaber (naked mole-rat) : Ltn1 (listerin E3 ubiquitin protein ligase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01127,023,328 - 27,080,575 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,022,986 - 27,080,701 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01130,648,567 - 30,706,023 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41127,126,258 - 27,184,111 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11127,126,258 - 27,134,341 (-)NCBI
Celera1126,356,355 - 26,413,197 (-)NCBICelera
Cytogenetic Map11q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ltn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311238
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.