Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sel1l2 (SEL1L2 adaptor subunit of ERAD E3 ligase) Rattus norvegicus
Analyze
Symbol: Sel1l2
Name: SEL1L2 adaptor subunit of ERAD E3 ligase
Description: Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to localize to Hrd1p ubiquitin ligase ERAD-L complex. Orthologous to human SEL1L2 (SEL1L2 adaptor subunit of ERAD E3 ligase); INTERACTS WITH acrylamide; bisphenol A; trichloroethene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC311470; protein sel-1 homolog 2; RGD1311278; sel-1 suppressor of lin-12-like 2; sel-1 suppressor of lin-12-like 2 (C. elegans); sel-1L2; SEL1L2 ERAD E3 ligase adaptor subunit; similar to dJ842G6.2 (novel protein imilar to SEL1L (sel-1 (suppressor of lin-12, C.elegans)-like)); suppressor of lin-12-like protein 2
Orthologs:
Homo sapiens (human) : SEL1L2 (SEL1L2 adaptor subunit of ERAD E3 ligase)  HGNC  Alliance
Mus musculus (house mouse) : Sel1l2 (sel-1 suppressor of lin-12-like 2 (C. elegans))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sel1l2 (SEL1L2 adaptor subunit of ERAD E3 ligase)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100989420 (SEL1L2, ERAD E3 ligase adaptor subunit)
Canis lupus familiaris (dog) : SEL1L2 (SEL1L2 adaptor subunit of ERAD E3 ligase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sel1l2 (SEL1L2 adaptor subunit of ERAD E3 ligase)
Sus scrofa (pig) : SEL1L2 (SEL1L2 adaptor subunit of ERAD E3 ligase)
Chlorocebus sabaeus (African green monkey) : SEL1L2 (SEL1L2 adaptor subunit of ERAD E3 ligase)
Heterocephalus glaber (naked mole-rat) : Sel1l2 (SEL1L2 adaptor subunit of ERAD E3 ligase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03134,281,809 - 134,406,560 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3134,281,807 - 134,462,653 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03140,728,731 - 140,854,792 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43128,433,506 - 128,563,511 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13128,339,081 - 128,469,084 (-)NCBI
Celera3126,222,423 - 126,348,674 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sel1l2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311278
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-31
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.