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Gene: Champ1 (chromosome alignment maintaining phosphoprotein 1) Rattus norvegicus
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Symbol: Champ1
Name: chromosome alignment maintaining phosphoprotein 1
CRRD ID: 1311283
Description: Predicted to be involved in attachment of spindle microtubules to kinetochore and protein localization to organelle. Predicted to localize to several cellular components, including Flemming body; condensed chromosome kinetochore; and nuclear body. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 40. Orthologous to human CHAMP1 (chromosome alignment maintaining phosphoprotein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chromosome alignment-maintaining phosphoprotein 1; LOC306647; RGD1311283; similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H); Zfp828; zinc finger protein 828
Orthologs:
Homo sapiens (human) : CHAMP1 (chromosome alignment maintaining phosphoprotein 1)  HGNC  Alliance
Mus musculus (house mouse) : Champ1 (chromosome alignment maintaining phosphoprotein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Champ1 (chromosome alignment maintaining phosphoprotein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHAMP1 (chromosome alignment maintaining phosphoprotein 1)
Canis lupus familiaris (dog) : CHAMP1 (chromosome alignment maintaining phosphoprotein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Champ1 (chromosome alignment maintaining phosphoprotein 1)
Chlorocebus sabaeus (African green monkey) : CHAMP1 (chromosome alignment maintaining phosphoprotein 1)
Heterocephalus glaber (naked mole-rat) : Champ1 (chromosome alignment maintaining phosphoprotein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01680,839,373 - 80,850,340 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1680,839,374 - 80,850,340 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01680,403,594 - 80,414,561 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41680,569,713 - 80,573,705 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11680,571,519 - 80,573,925 (-)NCBI
Celera1673,542,848 - 73,553,807 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Champ1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311283
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.