Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tarsl2 (threonyl-tRNA synthetase-like 2) Rattus norvegicus
Analyze
Symbol: Tarsl2
Name: threonyl-tRNA synthetase-like 2
Description: Predicted to have threonine-tRNA ligase activity. Predicted to be involved in threonyl-tRNA aminoacylation. Predicted to localize to the cytoplasm and nucleus. Orthologous to human TARSL2 (threonyl-tRNA synthetase like 2); PARTICIPATES IN aminoacyl-tRNA biosynthetic pathway; INTERACTS WITH bisphenol A; flutamide; N-methyl-4-phenylpyridinium.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC308701; probable threonine--tRNA ligase 2, cytoplasmic; probable threonyl-tRNA synthetase 2, cytoplasmic; RGD1311308; similar to RIKEN cDNA A530046H20
Orthologs:
Homo sapiens (human) : TARSL2 (threonyl-tRNA synthetase like 2)  HGNC  Alliance
Mus musculus (house mouse) : Tarsl2 (threonyl-tRNA synthetase-like 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tarsl2 (threonyl-tRNA synthetase like 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TARSL2 (threonyl-tRNA synthetase like 2)
Canis lupus familiaris (dog) : TARSL2 (threonyl-tRNA synthetase like 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tarsl2 (threonyl-tRNA synthetase like 2)
Sus scrofa (pig) : TARSL2 (threonyl-tRNA synthetase like 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01126,523,169 - 126,559,493 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01127,615,710 - 127,674,850 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41120,050,878 - 120,087,520 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11120,129,220 - 120,165,862 (+)NCBI
Celera1111,429,067 - 111,465,708 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tarsl2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311308
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.