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Gene: Smdt1 (single-pass membrane protein with aspartate-rich tail 1) Rattus norvegicus
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Symbol: Smdt1
Name: single-pass membrane protein with aspartate-rich tail 1
Description: Predicted to be involved in calcium import into the mitochondrion and mitochondrial calcium ion homeostasis. Predicted to localize to integral component of mitochondrial inner membrane; nucleoplasm; and uniplex complex. Orthologous to human SMDT1 (single-pass membrane protein with aspartate rich tail 1); INTERACTS WITH bisphenol A; 2,3',4,4',5-Pentachlorobiphenyl (ortholog); 2-hydroxypropanoic acid (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: essential MCU regulator, mitochondrial; LOC315166; RGD1311310; similar to hypothetical protein supported by AL449243; uncharacterized protein LOC315166
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07123,578,677 - 123,581,925 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,578,878 - 123,580,839 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07123,563,411 - 123,566,644 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,721,790 - 120,724,935 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17120,753,567 - 120,759,164 (+)NCBI
Celera7110,176,835 - 110,180,083 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smdt1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311310
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.