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Gene: Utp4 (UTP4 small subunit processome component) Rattus norvegicus
Symbol: Utp4
Name: UTP4 small subunit processome component
Description: Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and regulation of transcription, DNA-templated. Predicted to localize to several cellular components, including 90S preribosome; nucleolus; and small-subunit processome. Human ortholog(s) of this gene implicated in cholestasis and primary biliary cirrhosis. Orthologous to human UTP4 (UTP4 small subunit processome component); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.
Type: protein-coding
Also known as: Cirh1a; cirhin; cirrhosis, autosomal recessive 1A; cirrhosis, autosomal recessive 1A (cirhin); cirrhosis, autosomal recessive 1A (human); LOC291987; MGC95114; Naic; Teg-292; testis-expressed gene 292; Tex292; U3 small nucleolar RNA-associated protein 4 homolog; UTP4 small subunit (SSU) processome component
Homo sapiens (human) : UTP4 (UTP4 small subunit processome component)  HGNC  Alliance
Mus musculus (house mouse) : Utp4 (UTP4 small subunit processome component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Utp4 (UTP4 small subunit processome component)
Pan paniscus (bonobo/pygmy chimpanzee) : UTP4 (UTP4 small subunit processome component)
Canis lupus familiaris (dog) : UTP4 (UTP4 small subunit processome component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Utp4 (UTP4 small subunit processome component)
Sus scrofa (pig) : UTP4 (UTP4 small subunit processome component)
Chlorocebus sabaeus (African green monkey) : UTP4 (UTP4 small subunit processome component)
Heterocephalus glaber (naked mole-rat) : Utp4 (UTP4 small subunit processome component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01939,087,995 - 39,116,124 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1939,087,990 - 39,116,125 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01949,952,283 - 49,980,522 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41936,742,206 - 36,770,285 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11936,747,086 - 36,775,165 (+)NCBI
Celera1934,216,482 - 34,244,580 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Utp4
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311341
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.