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Gene: Rfxank (regulatory factor X-associated ankyrin-containing protein) Rattus norvegicus
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Symbol: Rfxank
Name: regulatory factor X-associated ankyrin-containing protein
CRRD ID: 1311390
Description: Predicted to contribute to transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in Ras protein signal transduction and positive regulation of transcription by RNA polymerase II. Predicted to localize to several cellular components, including cytosol; intercellular bridge; and nucleoplasm. Human ortholog(s) of this gene implicated in MHC class II deficiency and severe combined immunodeficiency. Orthologous to human RFXANK (regulatory factor X associated ankyrin containing protein); PARTICIPATES IN antigen processing and presentation pathway; primary immunodeficiency pathway; tuberculosis pathway; INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-binding protein RFXANK; LOC306353
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01621,029,449 - 21,037,080 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1621,029,596 - 21,037,078 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,879,055 - 20,886,951 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,764,913 - 19,772,281 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11619,764,910 - 19,772,277 (+)NCBI
Celera1619,469,978 - 19,477,481 (+)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rfxank
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311390
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.