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Gene: Ppcs (phosphopantothenoylcysteine synthetase) Rattus norvegicus
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Symbol: Ppcs
Name: phosphopantothenoylcysteine synthetase
Description: Predicted to have phosphopantothenate--cysteine ligase activity and protein homodimerization activity. Predicted to be involved in acetyl-CoA biosynthetic process; coenzyme A biosynthetic process; and heart process. Orthologous to human PPCS (phosphopantothenoylcysteine synthetase); PARTICIPATES IN pantothenic acid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC298490; MGC116383; phosphopantothenate--cysteine ligase; RGD1311399; similar to RIKEN cDNA 6330579B17 gene
Orthologs:
Homo sapiens (human) : PPCS (phosphopantothenoylcysteine synthetase)  HGNC  Alliance
Mus musculus (house mouse) : Ppcs (phosphopantothenoylcysteine synthetase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ppcs (phosphopantothenoylcysteine synthetase)
Pan paniscus (bonobo/pygmy chimpanzee) : PPCS (phosphopantothenoylcysteine synthetase)
Canis lupus familiaris (dog) : PPCS (phosphopantothenoylcysteine synthetase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ppcs (phosphopantothenoylcysteine synthetase)
Sus scrofa (pig) : PPCS (phosphopantothenoylcysteine synthetase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05138,466,298 - 138,470,108 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5138,466,293 - 138,470,096 (-)Ensembl
Rnor_5.05142,276,595 - 142,279,846 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45140,008,434 - 140,012,295 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15140,013,626 - 140,017,910 (-)NCBI
Celera5131,547,070 - 131,550,484 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ppcs
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311399
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.