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Gene: Gpatch11 (G patch domain containing 11) Rattus norvegicus
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Symbol: Gpatch11
Name: G patch domain containing 11
Description: Predicted to have nucleic acid binding activity. Predicted to localize to the kinetochore. Orthologous to human GPATCH11 (G-patch domain containing 11); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; furan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Ccdc75; coiled-coil domain containing 75; coiled-coil domain-containing protein 75; G patch domain-containing protein 11; LOC362685; RGD1311424; similar to hypothetical protein FLJ38348
Orthologs:
Homo sapiens (human) : GPATCH11 (G-patch domain containing 11)  HGNC  Alliance
Mus musculus (house mouse) : Gpatch11 (G patch domain containing 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpatch11 (G-patch domain containing 11)
Pan paniscus (bonobo/pygmy chimpanzee) : GPATCH11 (G-patch domain containing 11)
Canis lupus familiaris (dog) : GPATCH11 (G-patch domain containing 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpatch11 (G-patch domain containing 11)
Sus scrofa (pig) : GPATCH11 (G-patch domain containing 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.061,410,461 - 1,421,506 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl61,410,507 - 1,423,041 (+)Ensembl
Rnor_5.061,401,697 - 1,412,259 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.461,619,937 - 1,630,116 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.161,619,941 - 1,629,692 (+)NCBI
Celera615,888,195 - 15,898,395 (-)NCBICelera
Cytogenetic Map6q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gpatch11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311424
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.