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Gene: Sccpdh (saccharopine dehydrogenase (putative)) Rattus norvegicus
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Symbol: Sccpdh
Name: saccharopine dehydrogenase (putative)
Description: Predicted to have oxidoreductase activity. Predicted to be involved in glycolipid biosynthetic process. Predicted to localize to several cellular components, including the lipid droplet; midbody; and mitochondrion. Orthologous to human SCCPDH (saccharopine dehydrogenase (putative)); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; amiodarone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305021; probable saccharopine dehydrogenase; RGD1311440; saccharopine dehydrogenase-like oxidoreductase; similar to RIKEN cDNA C330023F11
Orthologs:
Homo sapiens (human) : SCCPDH (saccharopine dehydrogenase (putative))  HGNC  Alliance
Mus musculus (house mouse) : Sccpdh (saccharopine dehydrogenase (putative))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sccpdh (saccharopine dehydrogenase (putative))
Pan paniscus (bonobo/pygmy chimpanzee) : SCCPDH (saccharopine dehydrogenase (putative))
Canis lupus familiaris (dog) : SCCPDH (saccharopine dehydrogenase (putative))
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sccpdh (saccharopine dehydrogenase (putative))
Sus scrofa (pig) : SCCPDH (saccharopine dehydrogenase (putative))
Chlorocebus sabaeus (green monkey) : SCCPDH (saccharopine dehydrogenase (putative))
Heterocephalus glaber (naked mole-rat) : Sccpdh (saccharopine dehydrogenase (putative))
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01397,941,720 - 97,963,474 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1397,941,757 - 97,963,824 (+)Ensembl
Rnor_5.013102,717,994 - 102,739,748 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41395,349,783 - 95,371,537 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11395,538,718 - 95,560,472 (+)NCBI
Celera1390,951,306 - 90,973,041 (+)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sccpdh
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311440
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.