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Gene: Ccdc88b (coiled-coil domain containing 88B) Rattus norvegicus
Symbol: Ccdc88b
Name: coiled-coil domain containing 88B
Description: Predicted to have dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in several processes, including cytoplasmic microtubule organization; defense response to protozoan; and positive regulation of T cell proliferation. Predicted to localize to centrosome; cytoplasm; and membrane. Orthologous to human CCDC88B (coiled-coil domain containing 88B); PARTICIPATES IN mitogen activated protein kinase signaling pathway; neurotrophic factor signaling pathway; INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: MODEL
Also known as: coiled-coil domain-containing protein 88B; LOC293698; RGD1311475; similar to FLJ00354 protein
Homo sapiens (human) : CCDC88B (coiled-coil domain containing 88B)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc88b (coiled-coil domain containing 88B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc88b (coiled-coil domain containing 88B)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC88B (coiled-coil domain containing 88B)
Canis lupus familiaris (dog) : CCDC88B (coiled-coil domain containing 88B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc88b (coiled-coil domain containing 88B)
Sus scrofa (pig) : CCDC88B (coiled-coil domain containing 88B)
Chlorocebus sabaeus (African green monkey) : CCDC88B (coiled-coil domain containing 88B)
Heterocephalus glaber (naked mole-rat) : Ccdc88b (coiled-coil domain containing 88B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01222,102,436 - 222,118,485 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1222,102,437 - 222,118,459 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01229,093,019 - 229,108,951 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41209,520,224 - 209,536,201 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11209,678,880 - 209,708,626 (-)NCBI
Celera1201,571,162 - 201,587,460 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Ccdc88b
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311475
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.