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Gene: Vps18 (VPS18 core subunit of CORVET and HOPS complexes) Rattus norvegicus
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Symbol: Vps18
Name: VPS18 core subunit of CORVET and HOPS complexes
Description: Predicted to have actin binding activity; protein binding activity, bridging; and syntaxin binding activity. Predicted to be involved in several processes, including endosome to lysosome transport; regulation of vesicle-mediated transport; and vesicle docking involved in exocytosis. Localizes to the presynapse. Predicted to colocalize with the AP-3 adaptor complex. Orthologous to human VPS18 (VPS18 core subunit of CORVET and HOPS complexes); INTERACTS WITH bisphenol A; 17beta-estradiol (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC296083; vacuolar protein sorting 18 (yeast); vacuolar protein sorting 18 homolog; vacuolar protein sorting 18 homolog (S. cerevisiae); vacuolar protein sorting-associated protein 18 homolog; VPS18 CORVET/HOPS core subunit
Orthologs:
Homo sapiens (human) : VPS18 (VPS18 core subunit of CORVET and HOPS complexes)  HGNC  Alliance
Mus musculus (house mouse) : Vps18 (VPS18 CORVET/HOPS core subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps18 (VPS18 core subunit of CORVET and HOPS complexes)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS18 (VPS18 core subunit of CORVET and HOPS complexes)
Canis lupus familiaris (dog) : VPS18 (VPS18 core subunit of CORVET and HOPS complexes)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps18 (VPS18 core subunit of CORVET and HOPS complexes)
Sus scrofa (pig) : VPS18 (VPS18 core subunit of CORVET and HOPS complexes)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03111,097,352 - 111,108,206 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03117,648,071 - 117,658,925 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43105,805,381 - 105,816,235 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13105,702,019 - 105,712,066 (+)NCBI
Celera3105,192,710 - 105,203,564 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Vps18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311556
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.