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Gene: Ercc8 (ERCC excision repair 8, CSA ubiquitin ligase complex subunit) Rattus norvegicus
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Symbol: Ercc8
Name: ERCC excision repair 8, CSA ubiquitin ligase complex subunit
CRRD ID: 1311570
Description: Predicted to contribute to ubiquitin-protein transferase activity. Involved in response to auditory stimulus and response to organic cyclic compound. Localizes to cytoplasm; nucleus; and perikaryon. Human ortholog(s) of this gene implicated in Cockayne syndrome and UV-sensitive syndrome. Orthologous to human ERCC8 (ERCC excision repair 8, CSA ubiquitin ligase complex subunit); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 2,4-dinitrotoluene; 4,4'-diaminodiphenylmethane; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ckn1; Cockayne syndrome 1 (classical); DNA excision repair protein ERCC-8; excision repair cross-complementation group 8; excision repair cross-complementing rodent repair deficiency, complementation group 8; excision repaiross-complementing rodent repair deficiency, complementation group 8; LOC310071
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0239,434,617 - 39,473,392 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl239,434,634 - 39,472,017 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0258,518,950 - 58,557,726 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4239,382,976 - 39,420,764 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1239,303,350 - 39,340,773 (+)NCBI
Celera235,489,177 - 35,526,315 (+)NCBICelera
Cytogenetic Map2q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ercc8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311570
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.