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Gene: Afap1l1 (actin filament associated protein 1-like 1) Rattus norvegicus
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Symbol: Afap1l1
Name: actin filament associated protein 1-like 1
Description: Predicted to have SH3 domain binding activity. Predicted to localize to cytosol. Orthologous to human AFAP1L1 (actin filament associated protein 1 like 1); INTERACTS WITH 1,2-dimethylhydrazine; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: actin filament-associated protein 1-like 1; actin filament-associated protein, 110 kDa; AFAP1-like protein 1; LOC291565; RGD1311580; similar to actin filament associated protein
Orthologs:
Homo sapiens (human) : AFAP1L1 (actin filament associated protein 1 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Afap1l1 (actin filament associated protein 1-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Afap1l1 (actin filament associated protein 1 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AFAP1L1 (actin filament associated protein 1 like 1)
Canis lupus familiaris (dog) : AFAP1L1 (actin filament associated protein 1 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Afap1l1 (actin filament associated protein 1 like 1)
Sus scrofa (pig) : AFAP1L1 (actin filament associated protein 1 like 1)
Chlorocebus sabaeus (African green monkey) : AFAP1L1 (actin filament associated protein 1 like 1)
Heterocephalus glaber (naked mole-rat) : Afap1l1 (actin filament associated protein 1 like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01857,052,659 - 57,114,589 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1857,053,947 - 57,114,545 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01856,280,997 - 56,342,893 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,707,563 - 57,768,151 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11857,765,171 - 57,844,174 (-)NCBI
Celera1853,332,835 - 53,393,206 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Afap1l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311580
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.