Gene: Taf6 (TATA-box binding protein associated factor 6) Rattus norvegicus
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Symbol: Taf6
Name: TATA-box binding protein associated factor 6
Description: Predicted to have DNA binding activity; DNA-binding transcription factor activity; and aryl hydrocarbon receptor binding activity. Predicted to be involved in several processes, including RNA polymerase II preinitiation complex assembly; positive regulation of intrinsic apoptotic signaling pathway; and positive regulation of transcription initiation from RNA polymerase II promoter. Predicted to localize to the cytosol and nucleoplasm. Orthologous to human TAF6 (TATA-box binding protein associated factor 6); PARTICIPATES IN RNA polymerase II transcription initiation pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC288533; MGC112914; p80; TAF(II)70; TAF(II)80; TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor; TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80 kDa; TAFII-70; TAFII-80; TAFII70; TAFII80; TFIID subunit p80; transcription initiation factor TFIID 70 kDa subunit; transcription initiation factor TFIID 80 kDa subunit; transcription initiation factor TFIID subunit 6
Orthologs:
Homo sapiens (human) : TAF6 (TATA-box binding protein associated factor 6)  HGNC  Alliance
Mus musculus (house mouse) : Taf6 (TATA-box binding protein associated factor 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Taf6 (TATA-box binding protein associated factor 6)
Pan paniscus (bonobo/pygmy chimpanzee) : TAF6 (TATA-box binding protein associated factor 6)
Canis lupus familiaris (dog) : TAF6 (TATA-box binding protein associated factor 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf6 (TATA-box binding protein associated factor 6)
Sus scrofa (pig) : TAF6 (TATA-box binding protein associated factor 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,320,269 - 19,328,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01221,377,899 - 21,386,267 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41217,620,900 - 17,629,268 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11217,610,570 - 17,618,803 (-)NCBI
Celera1218,986,031 - 18,994,399 (-)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Taf6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1311608
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.